The Art Of Noise June 1, 2009
Posted by gordonwatts in science.4 comments
We like to say that science is deterministic. You do x,y, and z, and then a will happen. I 100% agree with this. Except when it comes to noise.
What is noise? This is part of the problem – it comes in so many forms. Noise is like a weed. We call a plant a weed when it doesn’t belong. Got grass in your garden? It is a weed. Got grass in your lawn? Definitely now a weed. Is your cell phone making buzz-buzz-buzz sounds on your computer speakers? Noise! Are you using the cell phone signal to talk? Not noise!
But electronic noise is more insidious than the weed analogy implies. If you have an iPhone you can do the following experiment. Sit down at a computer that has separate speakers – the key is that an exposed wire connects the speakers to the computer. Place the iPhone near the speakers*. Wait for a few minutes. Now you’ll hear the buzz-buzz-buzz. So you know the source – you put the iPhone near the computer and it makes that buzzing sound. Lets say you didn’t know that. You had the iPhone in your pocket, and you walked up to your computer – it would start buzzing. You’d notice that every time you were near you’d get the buzzing. You might conclude you were the source of noise (talk about a loud heartbeat!!). You’d be both right and wrong.
The beauty of science is that if you do a, b, and c, then x will happen. Electronic noise is very much about science – if you do x, y, and z then you’ll get noise. The problem is it is very very difficult to determine what x, y, and z are. Above x might be “walk near your computer”, and y might be “have iPhone in your pocket”. You might get x right away, and then give up on fixing the speaker. A computer is no good if you can’t be near it! If you figured out y you might be able to do something different (like leaving your iPhone across the room, or better shield your speakers).
This is why finding and diagnosing electronic noise is an art.
I was on shift for two nights last week. On Friday night we saw a strange noise pattern in D0’s calorimeter. The pattern of noise is called high noon. And it was in four crates of electronics – typical high noon noise is never seen in more than one crate at a time. Experts were here until 2am trying to figure out what the source was. No clue. Eventually they went home – have to investigate the next morning when everyone was awake. Impact on data seemed to be minimal, and the automatic noise detection algorithms seemed perfectly capable of detecting this type of noise.
There were other problems with the detector that night too. A muon phototube kept looking synchronization with the readout. Each time this happens an automatic system would rap its knuckles and bring it back into line. Finally, after it had lost sync about 20 times, we decided to hit it with a hammer: reset it. And lo… the noise in the calorimeter, which had been mocking us for the last 6 hours disappeared.
Keep in mind – the muon system is meters away from the calorimeter system. They share no common electronics – not even racks of electronics are shared by the two. But the muon system was acting like the cell phone, transmitting electronic noise and the calorimeter was acting like an antenna – the speaker wire – and picking up the noise. D0 has been running since 2001. As far as I know, no one had seen this particular failure mode before.
If anyone tells you science isn’t an art – that there is no room for creativity – they are full of it. There are a lot of unknowns in unsolved problems – and it takes some creativity to guess what those unknowns are. And that is also the point behind reproducibility – to make sure you found x, y, and z that produce effect a.
Long live art!
* BTW, the iPhone isn’t the only one that will do this, it is just the worst offender of any of the smart phones I’ve seen. And easy way to fix it is place the iPhone on some tin foil. I’m not sure if that is because the tin foil becomes an antenna and so the iPhone needs less power to communicate with the tower or because it provides some shielding. But it works.
See? Art!
2009. Ready or not January 2, 2009
Posted by gordonwatts in ATLAS, CERN, D0, Fermilab, LHC, politics, science.4 comments
We’ve made it through the first day of 2009. I have mixed feelings about this coming year.
- Federal Science Funding Levels. The economy is crashing down around our ears. Business responds quickly (layoffs
) – government is a bit slower. If things followed their natural course of action that would mean science funding, along with everything else, will take yet another hit. However, the incoming Obama administration seems to be committed to spending the USA’s way out of this recession, so in the end funding might not change very much. I am hopeful that hard sciences funding will remain at least stable. - Federal Science Funding Directions. Climate change is what the Obama administration is focused on. There is a good chance that if you are researching something connected with climate change you may have access to increased funding opportunities. I would expect a funding profile similar to NIH’s funding during its years of increase. I would like to think that funding will spill over into the physical sciences – it should because there are connections between the physical sciences and clean air technologies. All of this is applied scientific research. I hope that the pure research funding gets an increase as well, as an investment in this countries future (particle physics is pure research, of course). I’m feeling neutral here.
- Federal Science. Obama’s science team is just a BLAST of fresh air when compared to the current administration’s. After all, his DOE nominee is a Nobel prize winning experimental physicist. Even if the science advisor isn’t elevated to a cabinet position (PDF), there will be someone in the room that knows a great deal about science, research, and how it is done. Even if there are cuts to science funding, I’m very hopeful there will be intelligent cuts rather that unscientifically motivated cuts. I’m very hopeful in this respect.
- State Universities. The economy in states is depressing. Some states, like my own (Washington) that rely on sales tax are being hit hard and very fast. State universities can’t escape that, obviously, and my university is no exception. Unfortunately, this usually translates to reduced raises, inability to counter offers from outside, reduced support for research, etc. In our own department I wouldn’t be surprised if some people left for other universities that, for whatever reason, were able to make good offers in this awful climate. There is, in fact, already evidence this is happening. The only consolation is most universities are in the same boat, and so most of them are having similar problems. I know less about private universities, but I do know the endowments of many of them are also having difficulty. I’m very downbeat about this: it will be a rough two years at least, I think.
- My Science. When it comes to the Tevatron and the LHC… Well, I see no reason that the Tevatron shouldn’t continue to break records in luminosity (they just broke one earlier this week). And the experiments will continue to be flooded with data. While it is possible for one experiment or the other to have a catastrophic failure, I doubt that will happen. And they should continue to produce papers and science at a furious rate. I also am looking forward to real LHC collision data this year. While I hope it will be at the full 14 TeV, I suspect it is more likely to be at 2 TeV, just a hair above the Tevatron’s luminosity. We’ll hopefully know what the machine scientists think about that sometime in February. I’m really hopeful about this.
- New Years Resolutions. Well, I made only one. That way I have a hope of keeping it: make bread more often.
I think there is a chance that I will keep this one. Especially now that I’ve said it publically.
Of course, this should also be a fun year, as noted by the Beacon News:
Frustrated with their failed attempt to destroy the world in 2008, the scientists at Fermilab and their counterparts at Switzerland’s CERN physics lab resolve to perfect their new device, the Large Planet-Sucking Black-Hole-o-Tron.
Here is to another great year of data collection and science at the Tevatron and first collision data at the LHC!
Dance your Science December 8, 2008
Posted by gordonwatts in life, science.1 comment so far
Apparently, the Association for the Advancement of Science put together a contest for Ph.D. research: “Dance your Ph.D.”:
The contest is open to anyone who has (or is pursuing) a Ph.D. in any scientific field, such as physics, chemistry, biology, psychology, anthropology, or in science-related fields such as mathematics, engineering, linguistics, bioethics, the history of science, etc. regardless of whether you’ve remained in academia.
1. Make a video of your own Ph.D. dance.
2. Post the video on YouTube. (Some tips.) In the video’s information box, include your Ph.D. title and any relevant information (scientific or artistic) that you’d like to share.
All the entries and the four winners can be found at this page. There was only one entry in physics – astrophysics – oh well.
Something Smells Funny Out There November 25, 2008
Posted by gordonwatts in science.1 comment so far
Overbye has a good article in the Science Times today. It discusses all the recent results from satellite experiments that, given proper interpretation, may indicate further direct “particle” evidence for dark matter. That would be huge!
The reason I mention the article, however, is Overbye puts in a bunch relating to the competition between the various theorists who are trying to explain the dark matter signals. For example,
That theory was called “a delightful castle in the sky” by Dr. Gordon Kane, who said he was glad it kept Dr. Arkani-Hamed and his colleagues busy and diverted them from competing with him.
And there are a bunch more comments similar to that. Worth the read for the science as well as some of the story about how science is done. It ends with a great quote by ex-UW postdoc, who is now a professor at NYU, Neil Weiner:
In a year or two, we’ll either not be talking about this idea at all, or it will be all we’re talking about.
I love his optimism. If we actually know something definitive in a year or two that would be great! Sadly, in that time scale I don’t think the LHC will have very much to contribute (perhaps in two??)!
The Atom Smashers November 24, 2008
Posted by gordonwatts in Fermilab, USA, science.10 comments
The Atom Smashers (http://www.pbs.org/independentlens/atomsmashers/) will show on PBS on Tuesday night. It looks like it focuses on Fermilab and the particle physics research occurring there. I like their tag line:
After funding cut backs, Fermilab—a premier U.S. government research laboratory focusing on particle physics—is struggling to survive. Physics, politics and international competition collide as scientists race to find one of the most elusive sub-atomic particles ever theorized: the Higgs boson.
Elsewhere on the site the film makers claim they don’t try to answer questions – but rather to get you to "think":
We hope this film will raise the awareness of America’s strange relationship with science. We don’t attempt to answer questions in our film, but rather to raise them. Is this research worth doing? Should we care about it? Should the U.S. participate in it or let it get done elsewhere? Also, we hope to help demystify science and scientists. We’d love it if a viewer came away thinking, “You know, those scientists are not really that different from me."
That last line being one of the main points of this blog!! Leave a comment if you get a chance to see it – I’d like to know what you think!
This show is part of PBS’ Independent Lens project. I have no idea if it will be available online. I hope so as I don’t have a TV receiver (their videos online are all very short, so I might be out of luck)!
P.S. Sorry about the links (and lack of them) – the computer I’m on doesn’t have my normal blogging software and so is a pain-in-the-butt to use.
The LHC is too big to fail! November 17, 2008
Posted by gordonwatts in USA, politics, science.5 comments
Out of Control? Make up stuff! October 17, 2008
Posted by gordonwatts in science.5 comments
I listened to a fascinating podcast from NPR Science Friday on the way into work today. The segment, titled “When not in control, people imagine order”, describes how people in (stressful) situations out of their control they will come up with reasons for why things are happening around them – even if they aren’t correct. One example used in the broadcast was stamping your feet before going into a meeting. If you do that, the people in the meeting will be more likely to accept and agree with your ideas. Clearly, there can be no external cause-and-effect, but you could see… we all have these little superstitions. How about a base-ball batter.
They noted that military personal in battle environments tend to do the same thing. Fun fact: sales of astrology books increased during the great depression (does anyone know how to see sales of astrology books as a function of time on Amazon?).
As you might imagine, recognizing patterns in what is going on around us is part of our survival programming. If we can make order out of what is going on, we can predict it, and thus we can take advantage of it. Leave meat out? Bear comes around. Hey – lets set a trap! Except, it can go too far – stopping your feet can’t possibly have any effect on the people in the meeting; the best it can do is boost your confidence. But if you knew that perhaps you could take a more direct path to boosting your confidence (shot of tequila!?).
What I really liked about this was that this is what my job is supposed to be. I’m supposed to look at data and come up with patterns to describe the data I see. There are lots of effects that might or might not be relevant. All of us in this field think up patterns where they don’t actually exist. Indeed, one is encouraged to come up with patterns no matter how crazy. The key is that the patterns have to be tested. The stomping feet thing might be based on a one-time accident. But here we would have to invent a double-blind study to test that before declaring the correlation was causal.
The program is worth a listen – it is short, about 20 minutes. And you get to hear someone call in and note that this study can’t really be correct because it implies that everyone who thinks the Kennedy assassination was a conspiracy must be making up a pattern that doesn’t exist because they are under stress. And we all know that conspiracy theory is correct.
Keeping Perspective September 22, 2008
Posted by gordonwatts in USA, politics, science.3 comments
The bailout proposed by the US government to keep our financial system afloat is going to be about $700 billion (US). I’m guessing that is going to rise to about $1 trillion or so by the time all is said and done. I can’t really fault the government on this – now that we are here something like this has to be done. It looks bad to even myself and I’m sure if I knew more about economics I’d be even more scared for the US financial system.
The LHC cost about $7 billion. So, you could build 100 of those for the price of this bailout. But it doesn’t stop there – this is going to be a hang-over the US budget will be paying off for years to come. Guess what is going to get hit… you got it. I’m sure funding for science in general is going to be down in the future. Ugh. Not only is that 100 LHC’s worth of science (all types of science!!) we could have done, but it will mean less science in the future as well.
How stupid is that!? I don’t know who to get pissed off at either – this seems to be a problem of group think. Like the echo chamber of the blogosphere.
To the Moon and Mars – Is It True? September 3, 2008
Posted by gordonwatts in USA, politics, science.5 comments
I’m still in Ottawa, gently re-integrating myself back into North America. I can actually stay up past 9pm now (jet lag!). Going though old email I stumbled on this:
The Democratic presidential candidate has called for the U.S. to lead the way in terms of space exploration, and wants to put astronauts on the moon yet again.
On top of that, he also wants to pursue the eventual goal of putting astronauts on Mars.
Barack Obama has come out and stated that by 2020, he wants another U.S. trip to the moon, and has also promised full support, with a great deal of funding for NASA.
Is that really Obama’s position? Wait. I guess I can look at his web site now… Under Issues on his site Science isn’t listed. Wait — I was about to get lost in how little Science is mentioned on his web site – which is a whole other post. Just concentrating on NASA… Ok — couldn’t find it under issues. I did find this position paper. I found it via a search engine, so I’m not sure exactly what it was (talking points for a speach, etc.). But it directly addresses space exploration. First of all, it is balanced. It notes that basic research (for climate change, etc.) has all been cut. And that funding would have to be restored.
But it still talks about human space flight – and almost always as a feel-good exercise rather than something scientific. When he gets to the meat of the human space flight component of what he wants to do, he starts with the following:
Human spaceflight is important to America’s political, economic, technological, and scientific leadership.
and then
He supports a funding goal that maintains at least 10 percent of the total exploration systems budget for research and development.
So, 90% is all about feel good and getting back to the moon and mars, and 10% is about doing the actual science. Also, why is he so fixated on the microgravity experiments that were to take place on the International Space Station before funding cuts eliminated them?
I am a bit disappointed in this. I really don’t think it is a good use of our countries resources to send a person to Mars. I’m all for sending more robots there – lots of them. Much cheaper (it doesn’t matter so much if they don’t come back). And the science they can do is better (the rocket fuel you save on not sending a human you can use to send extra equipment).
I’d like to see this country get on with funding real science. And less of this:
“When I was growing up, NASA united Americans to a common purpose and inspired the world with accomplishments we are still proud of. Today, NASA is an organization that impacts many facets of American life. I believe NASA needs an inspirational vision for the 21st Century. My vision will build on the great goals set forth in recent years, to maintain a robust program of human space exploration and ensure the fulfillment of NASA’s mission….”
US ATLAS Construction: Check! July 2, 2008
Posted by gordonwatts in ATLAS, USA, science.2 comments
This is a by-product of big science – and the resulting management and budget oversight. The last bit of the ALTAS detector was shipped over to CERN a long long time ago. For example, at UW, we spent almost three years running continuous production for the forward muon chambers (the picture is that of one of them being lifted into place). The last one left our lab more than 2 years ago (might even have been 3 now). In fact, an astro-physics experiment has chopped up the large granite block and taken over the space already.
A project like ATLAS evolves. There is no real beginning. And it will be hard to identify an end. People will be working on it long after it has ceased to take data, for example.
But that isn’t true for the bureaucracy. Budgets and oversight demand a definite start and a definite end. And that just happened for the construction phase for the ATLAS project in the USA. The budget was tied off. No more money for construction. All wrapped up.
I originally wasn’t going to write anything about this. From the point of view of science and public interest in how ATLAS is doing this is, basically, a non-event. What do you care as long as ATLAS sees collisions and produces physics? You don’t care so much about the meat grinder aspect, just that the sausage tastes good, right?
It was the fairly continuous stream of emails that came after the announcement that changed my mind. It has slowed to a trickle now, but there is still about one a day congratulating everyone involved. From the point of view of the managers and people working in the funding agencies this is really a very big deal. BTW — most of the people managing this both inside and outside the funding agencies are scientists or ex-scientists themselves. At any rate — many of these folks labor outside the public eye, but they have done a great job keeping ATLAS going in the USA. After all, without funding, there is no way I or anyone else could participate in the physics! Howard Gordon, at Brookhaven, is mostly singled out for keeping the project on track, though many other names are mentioned.
As one of the congratulatory messages said: “On to operations!”… which happens to be what the physics phase of the funding will be called.
Weird to see how the bureaucracy in a project like this maps to the real life.
UPDATE: Fixed Howard Gordon’s affiliation.
